Index

A

apply() (in module dicom2nifti.patch_pydicom_encodings) apply_scaling() (in module dicom2nifti.common)

are_imaging_dicoms() (in module dicom2nifti.convert_dicom) ASCENDING (dicom2nifti.convert_siemens.MosaicType attribute) AXIAL (dicom2nifti.image_volume.SliceType attribute)

C

ConversionError ConversionValidationError convert_directory() (in module dicom2nifti.convert_dir)

CORONAL (dicom2nifti.image_volume.SliceType attribute) create_affine() (in module dicom2nifti.common) create_rgba_nifti() (in module dicom2nifti.convert_generic)

D

DESCENDING (dicom2nifti.convert_siemens.MosaicType attribute) dicom2nifti module dicom2nifti.common module dicom2nifti.convert_dicom module dicom2nifti.convert_dir module dicom2nifti.convert_ge module dicom2nifti.convert_generic module dicom2nifti.convert_hitachi module dicom2nifti.convert_philips module dicom2nifti.convert_siemens module dicom2nifti.exceptions module dicom2nifti.image_reorientation module

dicom2nifti.image_volume module dicom2nifti.patch_pydicom_encodings module dicom2nifti.resample module dicom2nifti.settings module dicom_array_to_nifti() (in module dicom2nifti.convert_dicom) dicom_series_to_nifti() (in module dicom2nifti.convert_dicom) dicom_to_nifti() (in module dicom2nifti.convert_ge) (in module dicom2nifti.convert_generic) (in module dicom2nifti.convert_hitachi) (in module dicom2nifti.convert_philips) (in module dicom2nifti.convert_siemens) disable_pydicom_read_force() (in module dicom2nifti.settings) disable_resampling() (in module dicom2nifti.settings) disable_validate_instance_number() (in module dicom2nifti.settings) disable_validate_multiframe_implicit() (in module dicom2nifti.settings) disable_validate_orientation() (in module dicom2nifti.settings) disable_validate_orthogonal() (in module dicom2nifti.settings) disable_validate_slice_increment() (in module dicom2nifti.settings) disable_validate_slicecount() (in module dicom2nifti.settings) do_scaling() (in module dicom2nifti.common)

E

enable_pydicom_read_force() (in module dicom2nifti.settings) enable_resampling() (in module dicom2nifti.settings) enable_validate_instance_number() (in module dicom2nifti.settings) enable_validate_multiframe_implicit() (in module dicom2nifti.settings)

enable_validate_orientation() (in module dicom2nifti.settings) enable_validate_orthogonal() (in module dicom2nifti.settings) enable_validate_slice_increment() (in module dicom2nifti.settings) enable_validate_slicecount() (in module dicom2nifti.settings)

G

GE (dicom2nifti.convert_dicom.Vendor attribute) GENERIC (dicom2nifti.convert_dicom.Vendor attribute) get_fd_array_value() (in module dicom2nifti.common) get_fd_value() (in module dicom2nifti.common) get_fl_value() (in module dicom2nifti.common)

get_is_value() (in module dicom2nifti.common) get_nifti_data() (in module dicom2nifti.common) get_numpy_type() (in module dicom2nifti.common) get_slice() (dicom2nifti.image_volume.ImageVolume method) get_ss_value() (in module dicom2nifti.common) get_volume_pixeldata() (in module dicom2nifti.common)

H

HITACHI (dicom2nifti.convert_dicom.Vendor attribute)

I

ImageVolume (class in dicom2nifti.image_volume) is_ge() (in module dicom2nifti.common) is_hitachi() (in module dicom2nifti.common) is_multiframe_dicom() (in module dicom2nifti.common) is_orthogonal() (in module dicom2nifti.common)

is_orthogonal_nifti() (in module dicom2nifti.common) is_philips() (in module dicom2nifti.common) is_siemens() (in module dicom2nifti.common) is_slice_increment_inconsistent() (in module dicom2nifti.common) is_valid_imaging_dicom() (in module dicom2nifti.common)

L

load() (in module dicom2nifti.image_volume)

M

module dicom2nifti dicom2nifti.common dicom2nifti.convert_dicom dicom2nifti.convert_dir dicom2nifti.convert_ge dicom2nifti.convert_generic dicom2nifti.convert_hitachi dicom2nifti.convert_philips dicom2nifti.convert_siemens dicom2nifti.exceptions dicom2nifti.image_reorientation dicom2nifti.image_volume dicom2nifti.patch_pydicom_encodings dicom2nifti.resample dicom2nifti.settings

MosaicType (class in dicom2nifti.convert_siemens) multiframe_create_affine() (in module dicom2nifti.common) multiframe_get_volume_pixeldata() (in module dicom2nifti.common) multiframe_is_orthogonal() (in module dicom2nifti.common) multiframe_is_slice_increment_inconsistent() (in module dicom2nifti.common) multiframe_to_nifti() (in module dicom2nifti.convert_generic) multiframe_validate_orientation() (in module dicom2nifti.common) multiframe_validate_orthogonal() (in module dicom2nifti.common) multiframe_validate_slice_increment() (in module dicom2nifti.common) multiframe_validate_slicecount() (in module dicom2nifti.common)

N

normal_component (dicom2nifti.image_volume.SliceOrientation attribute)

O

original_data (dicom2nifti.image_volume.Slice attribute)

P

PHILIPS (dicom2nifti.convert_dicom.Vendor attribute)

R

read_dicom_directory() (in module dicom2nifti.common) remove_duplicate_slices() (in module dicom2nifti.convert_generic) remove_localizers_by_imagetype() (in module dicom2nifti.convert_generic)

remove_localizers_by_orientation() (in module dicom2nifti.convert_generic) reorient_image() (in module dicom2nifti.image_reorientation) resample_nifti_images() (in module dicom2nifti.resample) resample_single_nifti() (in module dicom2nifti.resample)

S

SAGITTAL (dicom2nifti.image_volume.SliceType attribute) set_fd_value() (in module dicom2nifti.common) set_gdcmconv_path() (in module dicom2nifti.settings) set_resample_padding() (in module dicom2nifti.settings) set_resample_spline_interpolation_order() (in module dicom2nifti.settings) set_ss_value() (in module dicom2nifti.common)

set_tr_te() (in module dicom2nifti.common) SIEMENS (dicom2nifti.convert_dicom.Vendor attribute) Slice (class in dicom2nifti.image_volume) slice_orientation (dicom2nifti.image_volume.Slice attribute) SliceOrientation (class in dicom2nifti.image_volume) SliceType (class in dicom2nifti.image_volume) sort_dicoms() (in module dicom2nifti.common)

V

validate_instance_number() (in module dicom2nifti.common) validate_orientation() (in module dicom2nifti.common) validate_orthogonal() (in module dicom2nifti.common)

validate_slice_increment() (in module dicom2nifti.common) validate_slicecount() (in module dicom2nifti.common) Vendor (class in dicom2nifti.convert_dicom)

W

write_bval_file() (in module dicom2nifti.common)

write_bvec_file() (in module dicom2nifti.common)

X

x_component (dicom2nifti.image_volume.SliceOrientation attribute)

x_inverted (dicom2nifti.image_volume.SliceOrientation attribute)

Y

y_component (dicom2nifti.image_volume.SliceOrientation attribute)

y_inverted (dicom2nifti.image_volume.SliceOrientation attribute)